Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916147.1_cds_XP_016465839.1_58755
CDS Infomation

[gene=LOC107788657] [db_xref=GeneID:107788657] [protein=probable C-terminal domain small phosphatase] [protein_id=XP_016465839.1] [location=join(24039..24510,24661..25041,25158..25239,25385..25451,30208..30393,30505..30565,32572..32738)] [gbkey=CDS]
Sequence

ATGGACGCAAGTTCAACTGAAGCTTCTGTTACGAAGAGTGCAGAATTGTTATTAAACAGG
AAAAGAAAAAGGGCGAGGAAGAAGGCTAACAGAAAAGAAAGACAGCAAAGGTTGGATCAA
ATGCTGCAAAATCTGGAGGCTCCTAGAAATGAAGAAAGTTCCATTGAAGACATGACTAGT
CTAGAGAATTCTAGCACACAATTGCTTCCTCTAGGACATCTAGAAATACAAACGGAATCG
GCCACAACTCTTTTGGAAAAGAGTGCTGGTAAGAAAAAGAGACGGAAGAAGAGAAGTGTG
ATGAAGGCGATGAACCAAAAGGGTGAGCCATGTAGCATGGTTCAGACCGATGTTCCCTCA
AATCCAAGCCTGTCGGATAGTAAGCATGGAGAAGTAGAAAATGGCCTACTCAATCCAAAC
ATTTCAACTCATGACTTTGTATCTTCCGAGAGGAAAGTAACTGAGGCATTGGATAGGGGA
CTTGACTCTCTGACGGGAGTCCAGAAAAAGGAAGCGAACACAGTTGCTCAAGAAAAGAAT
CATGATTCTTGTGCTGAGCGAGCTAAAAAAGATAATGCTAAGGTTGCAAATGATGCAATT
GAAGAAGTTTCATTATTTGAAGCTGGAAGAATTTCGGTGGAAAGCTGTAGTGAAAGGACT
CAACTCACAGACAAATCAGAGTTAATCATGCATTTTCATTCAGCTCCCATTAGGCCAGGT
GATTTCCGCATGATTGGAGGTCCTCGTATGAGGAGAAAACTTCTCATCCTCGATGTTAAT
GGGCTACTTGCAGATGTAGTCAATCCACCGCCAAAGAATTGTAATCCTGATGCATGTTTC
TCAAGACGGGCAATATTCAAGAGACCCTACTGTGATGAATTTCTGAAATTTTGCTTTGAA
AGATTTGACGTGGGCATCTGGTCTTCTAGATCCAAGAAGATCATTGTGAAAGTGGTGGAT
TATTTGTTGGGAAACATGAAGCATAAGTTGTTATTTTGTTGGGATATGTCACATAGCACT
CAGACAATGTTCAAGACACTTGATAACAAGCATAAGCCCTTGGTTTGCAAGGAGCTGAGC
AAGGTGTGGGACAGATATGATCCGAATCTACCCTGGGAAAGAGGGGATTATGATGAATCA
AATACTTTACTATTGGATGATTCTCCGTACAAGGCCTTGCTAAATCCTGCGCACACTGCG
ATATTTCCTCATTCTTACAACTTCAAGGCCGAGAATGATGATTCACTAGGCCCTGGAGGT
GATTTGCGAATTTATTTGGAAGGGTTATTAAAAGCCGAACATGTACAGAAGTACGTAGAG
CAACATCCATTTGGTCAGCGGGCAATCGATGATACAAGCTCAGATTGGAATTTTTACTCT
GATGTTCTTTGCAGTCTGCTTGGTCAATCAAGCTAA

Peptide Sequence

PEP ID

XP_016465839.1
PEP Infomation

PREDICTED: probable C-terminal domain small phosphatase [Nicotiana tabacum]
Sequence

MDASSTEASVTKSAELLLNRKRKRARKKANRKERQQRLDQMLQNLEAPRNEESSIEDMTS
LENSSTQLLPLGHLEIQTESATTLLEKSAGKKKRRKKRSVMKAMNQKGEPCSMVQTDVPS
NPSLSDSKHGEVENGLLNPNISTHDFVSSERKVTEALDRGLDSLTGVQKKEANTVAQEKN
HDSCAERAKKDNAKVANDAIEEVSLFEAGRISVESCSERTQLTDKSELIMHFHSAPIRPG
DFRMIGGPRMRRKLLILDVNGLLADVVNPPPKNCNPDACFSRRAIFKRPYCDEFLKFCFE
RFDVGIWSSRSKKIIVKVVDYLLGNMKHKLLFCWDMSHSTQTMFKTLDNKHKPLVCKELS
KVWDRYDPNLPWERGDYDESNTLLLDDSPYKALLNPAHTAIFPHSYNFKAENDDSLGPGG
DLRIYLEGLLKAEHVQKYVEQHPFGQRAIDDTSSDWNFYSDVLCSLLGQSS

Transcript Sequence

Gene sequence data has not been registered.